Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TCRBV5S1A1TA0A578 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.16
TCRBV5S1A1TA0A578 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
TCRBV5S1A1TA0A578 FEM1AP4-201ENST00000443167 1987 ntBASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 AL354811.1-201ENST00000610286 706 ntBASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV5S1A1TA0A578 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TCRBV5S1A1TA0A578 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TCRBV5S1A1TA0A578 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TCRBV5S1A1TA0A578 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
TCRBV5S1A1TA0A578 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TCRBV5S1A1TA0A578 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.31■■□□□ 1.16
TCRBV5S1A1TA0A578 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TCRBV5S1A1TA0A578 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.31■■□□□ 1.16
TCRBV5S1A1TA0A578 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.31■■□□□ 1.16
TCRBV5S1A1TA0A578 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TCRBV5S1A1TA0A578 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 AL358852.1-201ENST00000623174 1268 ntBASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV5S1A1TA0A578 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 AC005229.4-201ENST00000610085 2198 ntBASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
TCRBV5S1A1TA0A578 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 IRS3P-201ENST00000223076 1006 ntBASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 MIR6084-201ENST00000622012 110 ntBASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV5S1A1TA0A578 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.27■■□□□ 1.16
TCRBV5S1A1TA0A578 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
TCRBV5S1A1TA0A578 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
TCRBV5S1A1TA0A578 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV5S1A1TA0A578 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.27■■□□□ 1.16
TCRBV5S1A1TA0A578 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV5S1A1TA0A578 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.27■■□□□ 1.16
TCRBV5S1A1TA0A578 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 AL024507.2-201ENST00000606070 2574 ntBASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 AF106564.1-201ENST00000607058 2553 ntBASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TCRBV5S1A1TA0A578 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV5S1A1TA0A578 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV5S1A1TA0A578 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.25■■□□□ 1.15
TCRBV5S1A1TA0A578 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV5S1A1TA0A578 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms