Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 AC006015.1-201ENST00000429970 570 ntBASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 AP001160.3-201ENST00000601484 763 ntBASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 FAM99A-202ENST00000538190 1989 ntBASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
TRBV11-1A0A0K0K1C0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AC026471.6-201ENST00000622954 1905 ntBASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AC133561.1-201ENST00000568600 2415 ntBASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AC010141.2-201ENST00000452426 721 ntBASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 EEF1DP3-203ENST00000566025 782 ntBASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AC138907.5-202ENST00000569484 235 ntBASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AC053503.5-201ENST00000601508 636 ntBASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AC003102.1-202ENST00000563394 1796 ntBASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV11-1A0A0K0K1C0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRBV11-1A0A0K0K1C0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV11-1A0A0K0K1C0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV11-1A0A0K0K1C0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV11-1A0A0K0K1C0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV11-1A0A0K0K1C0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV11-1A0A0K0K1C0 KRT18P11-201ENST00000435214 1283 ntBASIC19.67■□□□□ 0.74
TRBV11-1A0A0K0K1C0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.67■□□□□ 0.74
TRBV11-1A0A0K0K1C0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.67■□□□□ 0.74
TRBV11-1A0A0K0K1C0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV11-1A0A0K0K1C0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms