Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 SRD5A1P1-201ENST00000442297 786 ntBASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 AL035685.1-201ENST00000636663 812 ntBASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV4-1A0A0J9YWV2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 GUSBP5-201ENST00000418136 578 ntBASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 AL512631.2-201ENST00000604634 923 ntBASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 LINC01521-201ENST00000504184 1943 ntBASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV4-1A0A0J9YWV2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 AL049796.1-201ENST00000565336 1766 ntBASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV4-1A0A0J9YWV2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 AC092171.4-201ENST00000609130 632 ntBASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 AP004607.7-201ENST00000527152 1677 ntBASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV4-1A0A0J9YWV2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 AL034346.1-201ENST00000568244 1277 ntBASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.45■□□□□ 0.7
TRBV4-1A0A0J9YWV2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV4-1A0A0J9YWV2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms