Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV8-4A0A0B4J246 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV8-4A0A0B4J246 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 LINC01960-201ENST00000563759 1884 ntBASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 SRD5A1P1-201ENST00000442297 786 ntBASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-4A0A0B4J246 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 AC004687.1-201ENST00000579003 1625 ntBASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-4A0A0B4J246 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-4A0A0B4J246 AC090340.1-201ENST00000620778 4980 ntBASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 DUX4L19-201ENST00000557448 1267 ntBASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV8-4A0A0B4J246 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms