Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 KLK10-201ENST00000309958 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 SMPD4-205ENST00000431183 3614 ntTSL 2 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 ZFP36L1-202ENST00000439696 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 CASP7-202ENST00000369315 2421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 CPT1A-206ENST00000540367 2496 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 SELENOP-214ENST00000514985 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 TM2D2-202ENST00000456397 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AP000532.2-201ENST00000428118 1730 ntTSL 2 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AC108062.1-203ENST00000511497 2012 ntTSL 2 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 BOLA2-SMG1P6-201ENST00000565417 3103 ntTSL 2 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 LINC00114-201ENST00000411989 1790 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 DMBX1-202ENST00000371956 2882 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 PLEKHM1P1-204ENST00000582201 3166 ntBASIC12.03□□□□□ -0.48
LMO3Q8TAP4 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 TMEM94-209ENST00000579208 3543 ntTSL 5 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 GPHA2-201ENST00000279168 747 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 CALCB-201ENST00000324229 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 RNA5S9-201ENST00000364451 119 ntBASIC12.03□□□□□ -0.48
LMO3Q8TAP4 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 OR10D5P-201ENST00000392760 915 ntBASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AL121672.2-201ENST00000412643 867 ntTSL 3 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 LINC00454-201ENST00000425483 503 ntTSL 3 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AL355990.1-202ENST00000443008 797 ntTSL 3 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 RN7SL340P-201ENST00000470792 296 ntBASIC12.03□□□□□ -0.48
LMO3Q8TAP4 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 RN7SL164P-201ENST00000482613 303 ntBASIC12.03□□□□□ -0.48
LMO3Q8TAP4 RN7SL645P-201ENST00000496148 269 ntBASIC12.03□□□□□ -0.48
LMO3Q8TAP4 C14orf159-208ENST00000517877 591 ntTSL 3 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 OR7E126P-201ENST00000526217 888 ntBASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AC020978.3-202ENST00000563175 457 ntTSL 3 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AC134312.4-201ENST00000568267 559 ntTSL 4 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AC025211.1-201ENST00000582272 373 ntTSL 3 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AC016866.1-201ENST00000584252 659 ntTSL 5 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 METTL23-213ENST00000591571 585 ntTSL 3 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 MECP2-212ENST00000611468 603 ntTSL 5 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 PSME2-217ENST00000615264 874 ntTSL 5 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AC010335.3-201ENST00000623767 531 ntBASIC12.03□□□□□ -0.48
LMO3Q8TAP4 PSME2-218ENST00000630027 185 ntTSL 3 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 MECP2-226ENST00000640414 897 ntTSL 5 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AC073957.3-201ENST00000609998 6758 ntBASIC12.03□□□□□ -0.48
LMO3Q8TAP4 DERL1-201ENST00000259512 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 SPATA3-206ENST00000452881 1618 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 TCOF1-203ENST00000394269 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 ST3GAL5-238ENST00000639432 2297 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AC097468.1-201ENST00000441450 1992 ntTSL 2 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AC099494.1-201ENST00000624763 1370 ntBASIC12.03□□□□□ -0.48
LMO3Q8TAP4 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
LMO3Q8TAP4 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LMO3Q8TAP4 YIPF5-204ENST00000513112 2135 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LMO3Q8TAP4 AC011389.1-209ENST00000507304 1489 ntTSL 2 BASIC12.02□□□□□ -0.48
LMO3Q8TAP4 AC027141.1-201ENST00000584680 1477 ntBASIC12.02□□□□□ -0.48
LMO3Q8TAP4 FAM92A1P2-201ENST00000502308 2455 ntBASIC12.02□□□□□ -0.48
LMO3Q8TAP4 PPP1R1A-202ENST00000547431 2491 ntTSL 5 BASIC12.02□□□□□ -0.48
LMO3Q8TAP4 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LMO3Q8TAP4 ZNF17-206ENST00000601808 2524 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
LMO3Q8TAP4 SLC35F6-201ENST00000344420 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LMO3Q8TAP4 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
LMO3Q8TAP4 GOT1-201ENST00000370508 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 ASNS-203ENST00000394309 2289 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 LINC02519-202ENST00000440168 2282 ntTSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 AC073133.2-201ENST00000436670 2698 ntTSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 ITPR1-219ENST00000544951 4131 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 C17orf75-202ENST00000577809 1642 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 EFCAB11-201ENST00000316738 3095 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 CST8-201ENST00000246012 890 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 KRTAP4-5-201ENST00000343246 879 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 DDIT3-201ENST00000346473 906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 C11orf65-201ENST00000393084 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 PPM1N-204ENST00000401593 548 ntTSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 AC068631.2-201ENST00000418776 501 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 AL160279.1-201ENST00000425861 721 ntBASIC12.02□□□□□ -0.49
LMO3Q8TAP4 ORM2-201ENST00000431067 760 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 LINC01079-201ENST00000431171 580 ntTSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 CDK5P1-201ENST00000442838 877 ntBASIC12.02□□□□□ -0.49
LMO3Q8TAP4 IP6K2-218ENST00000443964 973 ntTSL 4 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 AP001271.1-201ENST00000445532 206 ntTSL 3 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 AL365357.1-201ENST00000455621 357 ntBASIC12.02□□□□□ -0.49
LMO3Q8TAP4 IGKV1OR-2-201ENST00000457995 350 ntBASIC12.02□□□□□ -0.49
LMO3Q8TAP4 AC004224.1-201ENST00000459875 568 ntBASIC12.02□□□□□ -0.49
LMO3Q8TAP4 RN7SL240P-201ENST00000485204 286 ntBASIC12.02□□□□□ -0.49
LMO3Q8TAP4 AF107885.1-201ENST00000498401 958 ntBASIC12.02□□□□□ -0.49
LMO3Q8TAP4 IGHV3-25-201ENST00000518224 351 ntBASIC12.02□□□□□ -0.49
LMO3Q8TAP4 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 RN7SL322P-201ENST00000583519 299 ntBASIC12.02□□□□□ -0.49
LMO3Q8TAP4 KRTAP9-1-203ENST00000634358 330 ntTSL 5 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 ZNF738-201ENST00000311015 2442 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 LINC01777-201ENST00000423197 2077 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms