Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
EXOSC1Q9Y3B2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.05■□□□□ 0.64
EXOSC1Q9Y3B2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC1Q9Y3B2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
EXOSC1Q9Y3B2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.05■□□□□ 0.64
EXOSC1Q9Y3B2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.05■□□□□ 0.64
EXOSC1Q9Y3B2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.05■□□□□ 0.64
EXOSC1Q9Y3B2 AL049796.1-201ENST00000565336 1766 ntBASIC19.05■□□□□ 0.64
EXOSC1Q9Y3B2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC1Q9Y3B2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
EXOSC1Q9Y3B2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 AL031848.2-201ENST00000607670 837 ntBASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC1Q9Y3B2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 BX664725.1-201ENST00000438252 379 ntBASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
EXOSC1Q9Y3B2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
EXOSC1Q9Y3B2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EXOSC1Q9Y3B2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EXOSC1Q9Y3B2 KRT8P33-201ENST00000508125 1423 ntBASIC19.02■□□□□ 0.64
EXOSC1Q9Y3B2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EXOSC1Q9Y3B2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EXOSC1Q9Y3B2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
EXOSC1Q9Y3B2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.02■□□□□ 0.64
EXOSC1Q9Y3B2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.02■□□□□ 0.64
EXOSC1Q9Y3B2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
EXOSC1Q9Y3B2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
EXOSC1Q9Y3B2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
EXOSC1Q9Y3B2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
EXOSC1Q9Y3B2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.02■□□□□ 0.63
EXOSC1Q9Y3B2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.02■□□□□ 0.63
EXOSC1Q9Y3B2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
EXOSC1Q9Y3B2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
EXOSC1Q9Y3B2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms