Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 PCDHAC2-203ENST00000615316 3011 ntBASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 BX323043.1-201ENST00000641006 1765 ntBASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 DUX4L9-201ENST00000449051 1259 ntBASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRCH1Q9Y2L9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 AC131274.2-201ENST00000580697 1507 ntBASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 SMG8-203ENST00000578922 2178 ntBASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRCH1Q9Y2L9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 AC018755.3-202ENST00000596210 929 ntBASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LRCH1Q9Y2L9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 OXCT2P1-201ENST00000447263 1535 ntBASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 MIR6765-201ENST00000614092 87 ntBASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH1Q9Y2L9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 DUX4L18-201ENST00000553347 1267 ntBASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 LINC01960-201ENST00000563759 1884 ntBASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH1Q9Y2L9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms