Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC120498.10-201ENST00000621827 505 ntBASIC33.23■■■□□ 2.91
CDK11AQ9UQ88 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CDK11AQ9UQ88 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CDK11AQ9UQ88 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC33.22■■■□□ 2.91
CDK11AQ9UQ88 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC33.22■■■□□ 2.91
CDK11AQ9UQ88 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC33.22■■■□□ 2.91
CDK11AQ9UQ88 AC008175.2-201ENST00000612840 297 ntBASIC33.22■■■□□ 2.91
CDK11AQ9UQ88 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC33.22■■■□□ 2.91
CDK11AQ9UQ88 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC33.22■■■□□ 2.91
CDK11AQ9UQ88 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC33.22■■■□□ 2.91
CDK11AQ9UQ88 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 PHB2-213ENST00000546111 858 ntTSL 2 BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDK11AQ9UQ88 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CDK11AQ9UQ88 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CDK11AQ9UQ88 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
CDK11AQ9UQ88 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
CDK11AQ9UQ88 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.91
CDK11AQ9UQ88 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC33.2■■■□□ 2.91
CDK11AQ9UQ88 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC33.2■■■□□ 2.91
CDK11AQ9UQ88 POU5F1P4-201ENST00000413175 1085 ntBASIC33.19■■■□□ 2.9
CDK11AQ9UQ88 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
CDK11AQ9UQ88 ITM2C-210ENST00000620962 501 ntBASIC33.19■■■□□ 2.9
CDK11AQ9UQ88 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
CDK11AQ9UQ88 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC33.19■■■□□ 2.9
CDK11AQ9UQ88 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC33.18■■■□□ 2.9
CDK11AQ9UQ88 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC33.18■■■□□ 2.9
CDK11AQ9UQ88 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC33.18■■■□□ 2.9
CDK11AQ9UQ88 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC33.18■■■□□ 2.9
CDK11AQ9UQ88 AC093787.1-201ENST00000450396 207 ntBASIC33.18■■■□□ 2.9
CDK11AQ9UQ88 RNF146-206ENST00000480444 843 ntTSL 2 BASIC33.18■■■□□ 2.9
CDK11AQ9UQ88 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
CDK11AQ9UQ88 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
CDK11AQ9UQ88 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC33.18■■■□□ 2.9
CDK11AQ9UQ88 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
CDK11AQ9UQ88 RNA5SP413-201ENST00000516373 109 ntBASIC33.17■■■□□ 2.9
CDK11AQ9UQ88 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC33.17■■■□□ 2.9
CDK11AQ9UQ88 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC33.17■■■□□ 2.9
CDK11AQ9UQ88 AC016405.3-201ENST00000607710 860 ntBASIC33.17■■■□□ 2.9
CDK11AQ9UQ88 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CDK11AQ9UQ88 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CDK11AQ9UQ88 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC33.17■■■□□ 2.9
CDK11AQ9UQ88 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC33.16■■■□□ 2.9
CDK11AQ9UQ88 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDK11AQ9UQ88 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC33.16■■■□□ 2.9
CDK11AQ9UQ88 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC33.16■■■□□ 2.9
CDK11AQ9UQ88 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CDK11AQ9UQ88 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC33.15■■■□□ 2.9
CDK11AQ9UQ88 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CDK11AQ9UQ88 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC33.15■■■□□ 2.9
CDK11AQ9UQ88 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC33.15■■■□□ 2.9
CDK11AQ9UQ88 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC33.15■■■□□ 2.9
CDK11AQ9UQ88 AL162412.1-201ENST00000567129 965 ntBASIC33.15■■■□□ 2.9
CDK11AQ9UQ88 AC008687.6-201ENST00000596318 630 ntBASIC33.15■■■□□ 2.9
CDK11AQ9UQ88 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC33.15■■■□□ 2.9
CDK11AQ9UQ88 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC33.15■■■□□ 2.9
CDK11AQ9UQ88 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CDK11AQ9UQ88 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC33.14■■■□□ 2.9
CDK11AQ9UQ88 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CDK11AQ9UQ88 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC33.14■■■□□ 2.9
CDK11AQ9UQ88 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CDK11AQ9UQ88 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
CDK11AQ9UQ88 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CDK11AQ9UQ88 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC33.14■■■□□ 2.9
CDK11AQ9UQ88 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC33.13■■■□□ 2.89
CDK11AQ9UQ88 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC33.13■■■□□ 2.89
CDK11AQ9UQ88 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CDK11AQ9UQ88 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
CDK11AQ9UQ88 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
CDK11AQ9UQ88 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC33.13■■■□□ 2.89
CDK11AQ9UQ88 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC33.13■■■□□ 2.89
CDK11AQ9UQ88 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC33.13■■■□□ 2.89
CDK11AQ9UQ88 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 AC137767.1-201ENST00000602918 1920 ntBASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDK11AQ9UQ88 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CDK11AQ9UQ88 KRT16P2-201ENST00000414673 1423 ntBASIC33.11■■■□□ 2.89
CDK11AQ9UQ88 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CDK11AQ9UQ88 KRT18P29-201ENST00000397031 1267 ntBASIC33.11■■■□□ 2.89
CDK11AQ9UQ88 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC33.11■■■□□ 2.89
CDK11AQ9UQ88 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms