Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAMD4AQ9UPU9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 AC087239.1-201ENST00000622671 572 ntBASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SAMD4AQ9UPU9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 TSPY9P-201ENST00000440215 945 ntBASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 TSPY11P-201ENST00000442607 1045 ntBASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 pRNA.6-201ENST00000610482 90 ntBASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 pRNA.5-201ENST00000612139 90 ntBASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 pRNA.11-201ENST00000618423 90 ntBASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 pRNA.13-201ENST00000619112 90 ntBASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAMD4AQ9UPU9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SAMD4AQ9UPU9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SAMD4AQ9UPU9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.89■□□□□ 0.77
SAMD4AQ9UPU9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.89■□□□□ 0.77
SAMD4AQ9UPU9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SAMD4AQ9UPU9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.89■□□□□ 0.77
SAMD4AQ9UPU9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SAMD4AQ9UPU9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SAMD4AQ9UPU9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 AC239859.2-201ENST00000444165 318 ntBASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 MIR6724-1-201ENST00000616420 92 ntBASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 MIR6724-2-201ENST00000616483 92 ntBASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 MIR6724-4-201ENST00000617390 92 ntBASIC19.87■□□□□ 0.77
SAMD4AQ9UPU9 MIR6724-3-201ENST00000622482 92 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms