Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBQLN1Q9UMX0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.96■■□□□ 1.27
UBQLN1Q9UMX0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.96■■□□□ 1.27
UBQLN1Q9UMX0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBQLN1Q9UMX0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
UBQLN1Q9UMX0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBQLN1Q9UMX0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.96■■□□□ 1.27
UBQLN1Q9UMX0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
UBQLN1Q9UMX0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBQLN1Q9UMX0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBQLN1Q9UMX0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 AC010141.2-201ENST00000452426 721 ntBASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UBQLN1Q9UMX0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 RARRES2P11-201ENST00000635158 484 ntBASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 GUSBP5-202ENST00000510805 1989 ntBASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBQLN1Q9UMX0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBQLN1Q9UMX0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 BID-214ENST00000617586 542 ntTSL 5 BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.92■■□□□ 1.26
UBQLN1Q9UMX0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 AC003102.1-202ENST00000563394 1796 ntBASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
UBQLN1Q9UMX0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.9■■□□□ 1.26
UBQLN1Q9UMX0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms