Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18■□□□□ 0.47
RNF7Q9UBF6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18■□□□□ 0.47
RNF7Q9UBF6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF7Q9UBF6 AC055733.4-201ENST00000638462 1354 ntBASIC18■□□□□ 0.47
RNF7Q9UBF6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF7Q9UBF6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 TERF1P2-201ENST00000583350 1212 ntBASIC17.99■□□□□ 0.47
RNF7Q9UBF6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF7Q9UBF6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 MIR935-201ENST00000401179 91 ntBASIC17.98■□□□□ 0.47
RNF7Q9UBF6 AC079140.4-201ENST00000507448 529 ntBASIC17.98■□□□□ 0.47
RNF7Q9UBF6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 CCDC92B-201ENST00000575506 885 ntBASIC17.98■□□□□ 0.47
RNF7Q9UBF6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF7Q9UBF6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 KRT18P14-201ENST00000534205 1250 ntBASIC17.97■□□□□ 0.47
RNF7Q9UBF6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF7Q9UBF6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 AC026271.2-201ENST00000428091 497 ntBASIC17.96■□□□□ 0.47
RNF7Q9UBF6 AC034268.1-201ENST00000441047 882 ntBASIC17.96■□□□□ 0.47
RNF7Q9UBF6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF7Q9UBF6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF7Q9UBF6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF7Q9UBF6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF7Q9UBF6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RNF7Q9UBF6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF7Q9UBF6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF7Q9UBF6 AC087623.3-201ENST00000607047 1098 ntBASIC17.95■□□□□ 0.46
RNF7Q9UBF6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RNF7Q9UBF6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF7Q9UBF6 AC079834.2-201ENST00000609776 1949 ntBASIC17.95■□□□□ 0.46
RNF7Q9UBF6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF7Q9UBF6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms