Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCF1Q9UBD9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19■□□□□ 0.63
CLCF1Q9UBD9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19■□□□□ 0.63
CLCF1Q9UBD9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCF1Q9UBD9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 AC053503.5-201ENST00000601508 636 ntBASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCF1Q9UBD9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 AC080038.3-201ENST00000623346 1952 ntBASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLCF1Q9UBD9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 MYCNOS-205ENST00000641950 531 ntBASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCF1Q9UBD9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 AC026185.1-201ENST00000445748 174 ntBASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 KRT18P20-201ENST00000548986 1279 ntBASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCF1Q9UBD9 AC092053.2-201ENST00000640557 1818 ntBASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCF1Q9UBD9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 ID1-201ENST00000376105 1233 ntBASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms