Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.76
ECHDC1Q9NTX5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
ECHDC1Q9NTX5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
ECHDC1Q9NTX5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
ECHDC1Q9NTX5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ECHDC1Q9NTX5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ECHDC1Q9NTX5 FBXW4P1-201ENST00000426721 2239 ntBASIC26.07■■□□□ 1.76
ECHDC1Q9NTX5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ECHDC1Q9NTX5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.07■■□□□ 1.76
ECHDC1Q9NTX5 TERF1P2-201ENST00000583350 1212 ntBASIC26.07■■□□□ 1.76
ECHDC1Q9NTX5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
ECHDC1Q9NTX5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ECHDC1Q9NTX5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.06■■□□□ 1.76
ECHDC1Q9NTX5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 CCDC92B-201ENST00000575506 885 ntBASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.05■■□□□ 1.76
ECHDC1Q9NTX5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 AC097381.1-201ENST00000429019 1296 ntBASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ECHDC1Q9NTX5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ECHDC1Q9NTX5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
ECHDC1Q9NTX5 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.03■■□□□ 1.76
ECHDC1Q9NTX5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.03■■□□□ 1.76
ECHDC1Q9NTX5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ECHDC1Q9NTX5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.03■■□□□ 1.76
ECHDC1Q9NTX5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ECHDC1Q9NTX5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ECHDC1Q9NTX5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ECHDC1Q9NTX5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ECHDC1Q9NTX5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.02■■□□□ 1.76
ECHDC1Q9NTX5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ECHDC1Q9NTX5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ECHDC1Q9NTX5 MIR6821-201ENST00000617625 74 ntBASIC26.02■■□□□ 1.76
ECHDC1Q9NTX5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.02■■□□□ 1.76
ECHDC1Q9NTX5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.02■■□□□ 1.76
ECHDC1Q9NTX5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
ECHDC1Q9NTX5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.02■■□□□ 1.76
ECHDC1Q9NTX5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ECHDC1Q9NTX5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.01■■□□□ 1.75
ECHDC1Q9NTX5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.01■■□□□ 1.75
ECHDC1Q9NTX5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ECHDC1Q9NTX5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.01■■□□□ 1.75
ECHDC1Q9NTX5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ECHDC1Q9NTX5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ECHDC1Q9NTX5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26■■□□□ 1.75
ECHDC1Q9NTX5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ECHDC1Q9NTX5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26■■□□□ 1.75
ECHDC1Q9NTX5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26■■□□□ 1.75
ECHDC1Q9NTX5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26■■□□□ 1.75
ECHDC1Q9NTX5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ECHDC1Q9NTX5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
ECHDC1Q9NTX5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms