Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SDHAF3Q9NRP4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAF3Q9NRP4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 RARRES2P6-201ENST00000567333 442 ntBASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAF3Q9NRP4 CLDN5-201ENST00000403084 2357 ntBASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 MIR935-201ENST00000401179 91 ntBASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAF3Q9NRP4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.52■□□□□ 0.71
SDHAF3Q9NRP4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.52■□□□□ 0.71
SDHAF3Q9NRP4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 AC034268.1-201ENST00000441047 882 ntBASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 AC079140.4-201ENST00000507448 529 ntBASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 TERF1P2-201ENST00000583350 1212 ntBASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 AC055733.4-201ENST00000638462 1354 ntBASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAF3Q9NRP4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 KRT18P14-201ENST00000534205 1250 ntBASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 CCDC92B-201ENST00000575506 885 ntBASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAF3Q9NRP4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms