Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
ZNF556Q9HAH1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF556Q9HAH1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF556Q9HAH1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF556Q9HAH1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF556Q9HAH1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 AC079089.2-201ENST00000531211 1277 ntBASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 AL499627.2-201ENST00000606283 725 ntBASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 AC138932.1-201ENST00000534164 6830 ntBASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF556Q9HAH1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 AL033527.3-201ENST00000566366 1196 ntBASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 MTDHP2-201ENST00000601468 714 ntBASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ZNF556Q9HAH1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 LINC01521-201ENST00000504184 1943 ntBASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 AC092028.1-203ENST00000608262 953 ntBASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 OR7E47P-201ENST00000546390 1422 ntBASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF556Q9HAH1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF556Q9HAH1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 KRT125P-201ENST00000546827 989 ntBASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ZNF556Q9HAH1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.64■□□□□ 0.74
ZNF556Q9HAH1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.74
ZNF556Q9HAH1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF556Q9HAH1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF556Q9HAH1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZNF556Q9HAH1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.64■□□□□ 0.73
ZNF556Q9HAH1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF556Q9HAH1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ZNF556Q9HAH1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF556Q9HAH1 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.64■□□□□ 0.73
ZNF556Q9HAH1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.64■□□□□ 0.73
ZNF556Q9HAH1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF556Q9HAH1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF556Q9HAH1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms