Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 AL391005.1-201ENST00000623953 2435 ntBASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CYSTM1Q9H1C7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CYSTM1Q9H1C7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CYSTM1Q9H1C7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CYSTM1Q9H1C7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CYSTM1Q9H1C7 AP005212.1-201ENST00000581547 1997 ntBASIC12.52□□□□□ -0.41
CYSTM1Q9H1C7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CYSTM1Q9H1C7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CYSTM1Q9H1C7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CYSTM1Q9H1C7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CYSTM1Q9H1C7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 ALDH1A3-203ENST00000557963 1670 ntBASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CYSTM1Q9H1C7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CYSTM1Q9H1C7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 AC073314.1-201ENST00000568729 2216 ntBASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CYSTM1Q9H1C7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms