Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCM2Q9BSQ5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 AC034268.1-201ENST00000441047 882 ntBASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 CCDC92B-201ENST00000575506 885 ntBASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCM2Q9BSQ5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCM2Q9BSQ5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCM2Q9BSQ5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCM2Q9BSQ5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCM2Q9BSQ5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCM2Q9BSQ5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCM2Q9BSQ5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21■□□□□ 0.95
CCM2Q9BSQ5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21■□□□□ 0.95
CCM2Q9BSQ5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21■□□□□ 0.95
CCM2Q9BSQ5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCM2Q9BSQ5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21■□□□□ 0.95
CCM2Q9BSQ5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21■□□□□ 0.95
CCM2Q9BSQ5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
CCM2Q9BSQ5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 KRT18P14-201ENST00000534205 1250 ntBASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 AC026471.6-201ENST00000622954 1905 ntBASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCM2Q9BSQ5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCM2Q9BSQ5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.97■□□□□ 0.95
CCM2Q9BSQ5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 AC079140.4-201ENST00000507448 529 ntBASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCM2Q9BSQ5 AC003102.1-202ENST00000563394 1796 ntBASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 DUX4L2-201ENST00000561772 1275 ntBASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms