Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF559Q9BR84 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 YBX1P1-201ENST00000445822 960 ntBASIC19.72■□□□□ 0.75
ZNF559Q9BR84 AP005435.1-201ENST00000529293 1178 ntBASIC19.72■□□□□ 0.75
ZNF559Q9BR84 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF559Q9BR84 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 KRT18P5-201ENST00000436075 1291 ntBASIC19.71■□□□□ 0.75
ZNF559Q9BR84 SLC47A1P1-202ENST00000449666 945 ntBASIC19.71■□□□□ 0.75
ZNF559Q9BR84 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 AC007375.3-201ENST00000600936 2314 ntBASIC19.71■□□□□ 0.75
ZNF559Q9BR84 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 AC244015.2-201ENST00000616358 1861 ntBASIC19.71■□□□□ 0.75
ZNF559Q9BR84 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF559Q9BR84 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ZNF559Q9BR84 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF559Q9BR84 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF559Q9BR84 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNF559Q9BR84 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.7■□□□□ 0.74
ZNF559Q9BR84 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ZNF559Q9BR84 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF559Q9BR84 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNF559Q9BR84 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF559Q9BR84 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF559Q9BR84 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF559Q9BR84 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 AL034346.1-201ENST00000568244 1277 ntBASIC19.67■□□□□ 0.74
ZNF559Q9BR84 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms