Protein–RNA interactions for Protein: Q9BQ31

KCNS3, Potassium voltage-gated channel subfamily S member 3, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3Q9BQ31 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 AC106739.1-201ENST00000617035 715 ntBASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNS3Q9BQ31 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNS3Q9BQ31 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 AL353803.4-201ENST00000565882 1934 ntBASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 MIR638-201ENST00000385237 100 ntBASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 AC133561.4-201ENST00000566112 224 ntBASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 AL138724.1-201ENST00000606771 1088 ntBASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.45■□□□□ 0.7
KCNS3Q9BQ31 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 AC024257.2-201ENST00000549699 147 ntBASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.44■□□□□ 0.7
KCNS3Q9BQ31 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KCNS3Q9BQ31 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
KCNS3Q9BQ31 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 SERBP1P1-201ENST00000396021 1160 ntBASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 AC142381.2-201ENST00000566120 298 ntBASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 AC005837.3-201ENST00000612163 286 ntBASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms