Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXC2Q99958 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXC2Q99958 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.02■□□□□ 0.48
FOXC2Q99958 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXC2Q99958 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXC2Q99958 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXC2Q99958 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXC2Q99958 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FOXC2Q99958 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXC2Q99958 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
FOXC2Q99958 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
FOXC2Q99958 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 ECEL1P3-201ENST00000427961 737 ntBASIC18.01■□□□□ 0.47
FOXC2Q99958 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
FOXC2Q99958 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXC2Q99958 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXC2Q99958 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXC2Q99958 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
FOXC2Q99958 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
FOXC2Q99958 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 AL353803.4-201ENST00000565882 1934 ntBASIC18.01■□□□□ 0.47
FOXC2Q99958 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXC2Q99958 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXC2Q99958 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXC2Q99958 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXC2Q99958 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18■□□□□ 0.47
FOXC2Q99958 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18■□□□□ 0.47
FOXC2Q99958 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXC2Q99958 DUSP8P3-201ENST00000399571 1760 ntBASIC18■□□□□ 0.47
FOXC2Q99958 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXC2Q99958 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXC2Q99958 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
FOXC2Q99958 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18■□□□□ 0.47
FOXC2Q99958 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXC2Q99958 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18■□□□□ 0.47
FOXC2Q99958 MIR4497-201ENST00000583208 89 ntBASIC18■□□□□ 0.47
FOXC2Q99958 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18■□□□□ 0.47
FOXC2Q99958 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18■□□□□ 0.47
FOXC2Q99958 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXC2Q99958 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18■□□□□ 0.47
FOXC2Q99958 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18■□□□□ 0.47
FOXC2Q99958 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18■□□□□ 0.47
FOXC2Q99958 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18■□□□□ 0.47
FOXC2Q99958 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
FOXC2Q99958 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
FOXC2Q99958 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FOXC2Q99958 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXC2Q99958 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.99■□□□□ 0.47
FOXC2Q99958 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 AL162412.1-201ENST00000567129 965 ntBASIC17.99■□□□□ 0.47
FOXC2Q99958 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXC2Q99958 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXC2Q99958 AL359736.2-201ENST00000621992 437 ntBASIC17.99■□□□□ 0.47
FOXC2Q99958 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXC2Q99958 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
FOXC2Q99958 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXC2Q99958 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXC2Q99958 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXC2Q99958 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXC2Q99958 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXC2Q99958 DUSP8P5-201ENST00000422884 1815 ntBASIC17.98■□□□□ 0.47
FOXC2Q99958 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXC2Q99958 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXC2Q99958 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXC2Q99958 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.98■□□□□ 0.47
FOXC2Q99958 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXC2Q99958 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.98■□□□□ 0.47
FOXC2Q99958 EEF1DP3-203ENST00000566025 782 ntBASIC17.98■□□□□ 0.47
FOXC2Q99958 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXC2Q99958 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXC2Q99958 AC010331.1-201ENST00000611423 582 ntBASIC17.98■□□□□ 0.47
FOXC2Q99958 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXC2Q99958 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXC2Q99958 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXC2Q99958 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
FOXC2Q99958 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXC2Q99958 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms