Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PKP4Q99569 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.78■□□□□ 0.92
PKP4Q99569 TPRG1LP1-201ENST00000598702 760 ntBASIC20.78■□□□□ 0.92
PKP4Q99569 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.78■□□□□ 0.92
PKP4Q99569 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PKP4Q99569 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PKP4Q99569 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.78■□□□□ 0.92
PKP4Q99569 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PKP4Q99569 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PKP4Q99569 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PKP4Q99569 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.77■□□□□ 0.92
PKP4Q99569 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.77■□□□□ 0.92
PKP4Q99569 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PKP4Q99569 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.77■□□□□ 0.92
PKP4Q99569 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.77■□□□□ 0.92
PKP4Q99569 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PKP4Q99569 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PKP4Q99569 AC027612.3-201ENST00000413684 1047 ntBASIC20.77■□□□□ 0.92
PKP4Q99569 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.77■□□□□ 0.92
PKP4Q99569 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PKP4Q99569 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.77■□□□□ 0.92
PKP4Q99569 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.77■□□□□ 0.91
PKP4Q99569 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
PKP4Q99569 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PKP4Q99569 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PKP4Q99569 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PKP4Q99569 AC055733.4-201ENST00000638462 1354 ntBASIC20.76■□□□□ 0.91
PKP4Q99569 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PKP4Q99569 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PKP4Q99569 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PKP4Q99569 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PKP4Q99569 CLDN5-201ENST00000403084 2357 ntBASIC20.76■□□□□ 0.91
PKP4Q99569 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.76■□□□□ 0.91
PKP4Q99569 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.76■□□□□ 0.91
PKP4Q99569 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PKP4Q99569 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PKP4Q99569 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PKP4Q99569 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PKP4Q99569 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PKP4Q99569 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
PKP4Q99569 AC003102.1-202ENST00000563394 1796 ntBASIC20.75■□□□□ 0.91
PKP4Q99569 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP4Q99569 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PKP4Q99569 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PKP4Q99569 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP4Q99569 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.75■□□□□ 0.91
PKP4Q99569 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.75■□□□□ 0.91
PKP4Q99569 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.75■□□□□ 0.91
PKP4Q99569 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.75■□□□□ 0.91
PKP4Q99569 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP4Q99569 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PKP4Q99569 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PKP4Q99569 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PKP4Q99569 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP4Q99569 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP4Q99569 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PKP4Q99569 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PKP4Q99569 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP4Q99569 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PKP4Q99569 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.74■□□□□ 0.91
PKP4Q99569 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.74■□□□□ 0.91
PKP4Q99569 AC019069.1-201ENST00000610008 1333 ntBASIC20.74■□□□□ 0.91
PKP4Q99569 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP4Q99569 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP4Q99569 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.73■□□□□ 0.91
PKP4Q99569 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.73■□□□□ 0.91
PKP4Q99569 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP4Q99569 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PKP4Q99569 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP4Q99569 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PKP4Q99569 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PKP4Q99569 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.73■□□□□ 0.91
PKP4Q99569 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.73■□□□□ 0.91
PKP4Q99569 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP4Q99569 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.73■□□□□ 0.91
PKP4Q99569 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP4Q99569 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP4Q99569 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP4Q99569 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.72■□□□□ 0.91
PKP4Q99569 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP4Q99569 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP4Q99569 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
PKP4Q99569 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.72■□□□□ 0.91
PKP4Q99569 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.72■□□□□ 0.91
PKP4Q99569 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.72■□□□□ 0.91
PKP4Q99569 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.72■□□□□ 0.91
PKP4Q99569 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP4Q99569 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP4Q99569 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.72■□□□□ 0.91
PKP4Q99569 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms