Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 AC010141.2-201ENST00000452426 721 ntBASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 KRT18P20-201ENST00000548986 1279 ntBASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDK5RAP1Q96SZ6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 BID-214ENST00000617586 542 ntTSL 5 BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.16■■□□□ 1.14
CDK5RAP1Q96SZ6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 AC068473.5-201ENST00000616428 2072 ntBASIC22.15■■□□□ 1.14
CDK5RAP1Q96SZ6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.14■■□□□ 1.14
CDK5RAP1Q96SZ6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CDK5RAP1Q96SZ6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.14■■□□□ 1.13
CDK5RAP1Q96SZ6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 RARRES2P11-201ENST00000635158 484 ntBASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDK5RAP1Q96SZ6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms