Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 AC055733.4-201ENST00000638462 1354 ntBASIC17.34■□□□□ 0.37
ZNF48Q96MX3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF48Q96MX3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF48Q96MX3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF48Q96MX3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF48Q96MX3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF48Q96MX3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.33■□□□□ 0.37
ZNF48Q96MX3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF48Q96MX3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF48Q96MX3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF48Q96MX3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF48Q96MX3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF48Q96MX3 AL050303.2-201ENST00000619798 666 ntBASIC17.33■□□□□ 0.36
ZNF48Q96MX3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF48Q96MX3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF48Q96MX3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF48Q96MX3 AC127496.7-201ENST00000625110 1798 ntBASIC17.33■□□□□ 0.36
ZNF48Q96MX3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ZNF48Q96MX3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 GPX1P1-201ENST00000388829 606 ntBASIC17.32■□□□□ 0.36
ZNF48Q96MX3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 DUX4L16-201ENST00000555130 1264 ntBASIC17.32■□□□□ 0.36
ZNF48Q96MX3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 AP001160.3-201ENST00000601484 763 ntBASIC17.32■□□□□ 0.36
ZNF48Q96MX3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 ECEL1P1-201ENST00000373592 1742 ntBASIC17.32■□□□□ 0.36
ZNF48Q96MX3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZNF48Q96MX3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 GUSBP5-202ENST00000510805 1989 ntBASIC17.31■□□□□ 0.36
ZNF48Q96MX3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF48Q96MX3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 MYCNOS-205ENST00000641950 531 ntBASIC17.3■□□□□ 0.36
ZNF48Q96MX3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF48Q96MX3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 AP004607.7-201ENST00000527152 1677 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms