Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CMTM3Q96MX0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CMTM3Q96MX0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.35■□□□□ 0.53
CMTM3Q96MX0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.35■□□□□ 0.53
CMTM3Q96MX0 AL499627.2-201ENST00000606283 725 ntBASIC18.35■□□□□ 0.53
CMTM3Q96MX0 AL031602.1-201ENST00000633169 911 ntBASIC18.35■□□□□ 0.53
CMTM3Q96MX0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CMTM3Q96MX0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CMTM3Q96MX0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CMTM3Q96MX0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CMTM3Q96MX0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.35■□□□□ 0.53
CMTM3Q96MX0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CMTM3Q96MX0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.34■□□□□ 0.53
CMTM3Q96MX0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CMTM3Q96MX0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.33■□□□□ 0.53
CMTM3Q96MX0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CMTM3Q96MX0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CMTM3Q96MX0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CMTM3Q96MX0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CMTM3Q96MX0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.33■□□□□ 0.52
CMTM3Q96MX0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 HSD17B1P1-201ENST00000590052 955 ntBASIC18.32■□□□□ 0.52
CMTM3Q96MX0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CMTM3Q96MX0 AC006128.1-201ENST00000624704 1661 ntBASIC18.31■□□□□ 0.52
CMTM3Q96MX0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMTM3Q96MX0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 BHLHE23-202ENST00000612929 1109 ntBASIC18.3■□□□□ 0.52
CMTM3Q96MX0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CMTM3Q96MX0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms