Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SNRNP40Q96DI7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRNP40Q96DI7 RPS2P52-201ENST00000469610 820 ntBASIC19.28■□□□□ 0.68
SNRNP40Q96DI7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.28■□□□□ 0.68
SNRNP40Q96DI7 AL034346.1-201ENST00000568244 1277 ntBASIC19.28■□□□□ 0.68
SNRNP40Q96DI7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SNRNP40Q96DI7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRNP40Q96DI7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRNP40Q96DI7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 BX276092.2-201ENST00000417668 665 ntBASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 RARRES2P4-201ENST00000514074 484 ntBASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 ANOS2P-203ENST00000472227 1816 ntBASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP40Q96DI7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 DUSP5P2-201ENST00000426873 1033 ntBASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP40Q96DI7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 AC098590.1-201ENST00000468126 897 ntBASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNRNP40Q96DI7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 ESRRAP1-201ENST00000400596 1257 ntBASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 AC097658.1-201ENST00000475555 843 ntBASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 AC083880.1-201ENST00000608266 535 ntBASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 AP006294.2-201ENST00000641667 209 ntBASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 AP006587.3-201ENST00000525742 1516 ntBASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 LINC00526-201ENST00000581067 1875 ntBASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNRNP40Q96DI7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 AC092068.2-201ENST00000590491 1708 ntBASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNRNP40Q96DI7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms