Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
APH1AQ96BI3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APH1AQ96BI3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
APH1AQ96BI3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APH1AQ96BI3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
APH1AQ96BI3 ECEL1P1-201ENST00000373592 1742 ntBASIC18.91■□□□□ 0.62
APH1AQ96BI3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APH1AQ96BI3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.91■□□□□ 0.62
APH1AQ96BI3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.91■□□□□ 0.62
APH1AQ96BI3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.9■□□□□ 0.62
APH1AQ96BI3 PKD1P6-201ENST00000343738 4769 ntBASIC18.9■□□□□ 0.62
APH1AQ96BI3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APH1AQ96BI3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APH1AQ96BI3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APH1AQ96BI3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APH1AQ96BI3 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.9■□□□□ 0.62
APH1AQ96BI3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.9■□□□□ 0.62
APH1AQ96BI3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.9■□□□□ 0.62
APH1AQ96BI3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.9■□□□□ 0.62
APH1AQ96BI3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APH1AQ96BI3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APH1AQ96BI3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APH1AQ96BI3 AL117328.2-201ENST00000624617 1940 ntBASIC18.9■□□□□ 0.62
APH1AQ96BI3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.89■□□□□ 0.62
APH1AQ96BI3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.89■□□□□ 0.62
APH1AQ96BI3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
APH1AQ96BI3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
APH1AQ96BI3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
APH1AQ96BI3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APH1AQ96BI3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APH1AQ96BI3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.89■□□□□ 0.61
APH1AQ96BI3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.89■□□□□ 0.61
APH1AQ96BI3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
APH1AQ96BI3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.89■□□□□ 0.61
APH1AQ96BI3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.89■□□□□ 0.61
APH1AQ96BI3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.89■□□□□ 0.61
APH1AQ96BI3 NTF6G-201ENST00000591094 616 ntBASIC18.89■□□□□ 0.61
APH1AQ96BI3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
APH1AQ96BI3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APH1AQ96BI3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
APH1AQ96BI3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APH1AQ96BI3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APH1AQ96BI3 KRT87P-202ENST00000534226 1464 ntBASIC18.89■□□□□ 0.61
APH1AQ96BI3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APH1AQ96BI3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APH1AQ96BI3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APH1AQ96BI3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APH1AQ96BI3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APH1AQ96BI3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
APH1AQ96BI3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.88■□□□□ 0.61
APH1AQ96BI3 KRT18P5-201ENST00000436075 1291 ntBASIC18.88■□□□□ 0.61
APH1AQ96BI3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APH1AQ96BI3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.88■□□□□ 0.61
APH1AQ96BI3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.88■□□□□ 0.61
APH1AQ96BI3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
APH1AQ96BI3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APH1AQ96BI3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.88■□□□□ 0.61
APH1AQ96BI3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APH1AQ96BI3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.88■□□□□ 0.61
APH1AQ96BI3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APH1AQ96BI3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
APH1AQ96BI3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APH1AQ96BI3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APH1AQ96BI3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APH1AQ96BI3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APH1AQ96BI3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APH1AQ96BI3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
APH1AQ96BI3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APH1AQ96BI3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APH1AQ96BI3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
APH1AQ96BI3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.87■□□□□ 0.61
APH1AQ96BI3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.87■□□□□ 0.61
APH1AQ96BI3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APH1AQ96BI3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.87■□□□□ 0.61
APH1AQ96BI3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.87■□□□□ 0.61
APH1AQ96BI3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APH1AQ96BI3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.87■□□□□ 0.61
APH1AQ96BI3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APH1AQ96BI3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APH1AQ96BI3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APH1AQ96BI3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APH1AQ96BI3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
APH1AQ96BI3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms