Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 LINC00526-201ENST00000581067 1875 ntBASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 ECEL1P1-201ENST00000373592 1742 ntBASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3KBP1Q96B97 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
SH3KBP1Q96B97 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 LINC00565-201ENST00000562710 2331 ntBASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 AC009237.3-201ENST00000393279 1427 ntBASIC21.04■□□□□ 0.96
SH3KBP1Q96B97 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 AC079089.2-201ENST00000531211 1277 ntBASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3KBP1Q96B97 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 AC127496.7-201ENST00000625110 1798 ntBASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.02■□□□□ 0.96
SH3KBP1Q96B97 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.02■□□□□ 0.95
SH3KBP1Q96B97 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 AC137767.1-201ENST00000602918 1920 ntBASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3KBP1Q96B97 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms