Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM9SF4Q92544 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TM9SF4Q92544 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM9SF4Q92544 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TM9SF4Q92544 KRT18P11-201ENST00000435214 1283 ntBASIC20.1■□□□□ 0.81
TM9SF4Q92544 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.1■□□□□ 0.81
TM9SF4Q92544 BID-214ENST00000617586 542 ntTSL 5 BASIC20.1■□□□□ 0.81
TM9SF4Q92544 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.1■□□□□ 0.81
TM9SF4Q92544 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM9SF4Q92544 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM9SF4Q92544 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
TM9SF4Q92544 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TM9SF4Q92544 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.1■□□□□ 0.81
TM9SF4Q92544 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TM9SF4Q92544 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TM9SF4Q92544 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM9SF4Q92544 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TM9SF4Q92544 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM9SF4Q92544 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TM9SF4Q92544 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.09■□□□□ 0.81
TM9SF4Q92544 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.09■□□□□ 0.81
TM9SF4Q92544 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.09■□□□□ 0.81
TM9SF4Q92544 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.09■□□□□ 0.81
TM9SF4Q92544 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
TM9SF4Q92544 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.09■□□□□ 0.81
TM9SF4Q92544 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TM9SF4Q92544 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.08■□□□□ 0.81
TM9SF4Q92544 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM9SF4Q92544 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.08■□□□□ 0.81
TM9SF4Q92544 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM9SF4Q92544 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM9SF4Q92544 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TM9SF4Q92544 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.08■□□□□ 0.81
TM9SF4Q92544 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.08■□□□□ 0.81
TM9SF4Q92544 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM9SF4Q92544 HLA-L-209ENST00000420110 1011 ntBASIC20.08■□□□□ 0.81
TM9SF4Q92544 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TM9SF4Q92544 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.08■□□□□ 0.81
TM9SF4Q92544 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.08■□□□□ 0.81
TM9SF4Q92544 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.08■□□□□ 0.81
TM9SF4Q92544 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TM9SF4Q92544 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.08■□□□□ 0.8
TM9SF4Q92544 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TM9SF4Q92544 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TM9SF4Q92544 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM9SF4Q92544 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 AP004607.4-201ENST00000530158 1459 ntBASIC20.07■□□□□ 0.8
TM9SF4Q92544 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM9SF4Q92544 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM9SF4Q92544 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.07■□□□□ 0.8
TM9SF4Q92544 AL137060.1-201ENST00000618151 2648 ntBASIC20.06■□□□□ 0.8
TM9SF4Q92544 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
TM9SF4Q92544 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM9SF4Q92544 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM9SF4Q92544 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.06■□□□□ 0.8
TM9SF4Q92544 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.06■□□□□ 0.8
TM9SF4Q92544 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.06■□□□□ 0.8
TM9SF4Q92544 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.06■□□□□ 0.8
TM9SF4Q92544 SMUG1P1-201ENST00000590640 811 ntBASIC20.06■□□□□ 0.8
TM9SF4Q92544 AC004854.2-201ENST00000608450 1441 ntBASIC20.06■□□□□ 0.8
TM9SF4Q92544 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM9SF4Q92544 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.06■□□□□ 0.8
TM9SF4Q92544 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TM9SF4Q92544 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TM9SF4Q92544 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.06■□□□□ 0.8
TM9SF4Q92544 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM9SF4Q92544 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM9SF4Q92544 OXCT2P1-201ENST00000447263 1535 ntBASIC20.06■□□□□ 0.8
TM9SF4Q92544 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
TM9SF4Q92544 AL353803.4-201ENST00000565882 1934 ntBASIC20.06■□□□□ 0.8
TM9SF4Q92544 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF4Q92544 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF4Q92544 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF4Q92544 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF4Q92544 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.05■□□□□ 0.8
TM9SF4Q92544 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF4Q92544 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TM9SF4Q92544 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.05■□□□□ 0.8
TM9SF4Q92544 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF4Q92544 AC026185.1-201ENST00000445748 174 ntBASIC20.05■□□□□ 0.8
TM9SF4Q92544 AC079140.4-201ENST00000507448 529 ntBASIC20.05■□□□□ 0.8
TM9SF4Q92544 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TM9SF4Q92544 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.05■□□□□ 0.8
TM9SF4Q92544 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.05■□□□□ 0.8
TM9SF4Q92544 AC073111.5-205ENST00000641717 521 ntBASIC20.05■□□□□ 0.8
TM9SF4Q92544 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF4Q92544 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF4Q92544 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF4Q92544 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM9SF4Q92544 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms