Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTN4IP1Q8WWV3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.89■□□□□ 0.46
RTN4IP1Q8WWV3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RTN4IP1Q8WWV3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN4IP1Q8WWV3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 FEM1AP4-201ENST00000443167 1987 ntBASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 AL136116.3-201ENST00000402907 1138 ntBASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 AF106564.1-201ENST00000607058 2553 ntBASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 AC133637.1-201ENST00000624115 1537 ntBASIC17.88■□□□□ 0.45
RTN4IP1Q8WWV3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 DUX4L19-201ENST00000557448 1267 ntBASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 MIR3181-201ENST00000578512 73 ntBASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4IP1Q8WWV3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4IP1Q8WWV3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RTN4IP1Q8WWV3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms