Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 AC079089.2-201ENST00000531211 1277 ntBASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IL1Q8TBN0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 AL031602.1-201ENST00000633169 911 ntBASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IL1Q8TBN0 AIRN-201ENST00000601203 4374 ntBASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IL1Q8TBN0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 AL157384.1-201ENST00000445995 2473 ntBASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 YBX1P4-201ENST00000392794 808 ntBASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB3IL1Q8TBN0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.14■□□□□ 0.98
RAB3IL1Q8TBN0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB3IL1Q8TBN0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB3IL1Q8TBN0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB3IL1Q8TBN0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB3IL1Q8TBN0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB3IL1Q8TBN0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RAB3IL1Q8TBN0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.14■□□□□ 0.98
RAB3IL1Q8TBN0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RAB3IL1Q8TBN0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RAB3IL1Q8TBN0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB3IL1Q8TBN0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB3IL1Q8TBN0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.14■□□□□ 0.97
RAB3IL1Q8TBN0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAB3IL1Q8TBN0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB3IL1Q8TBN0 AC026471.6-201ENST00000622954 1905 ntBASIC21.14■□□□□ 0.97
RAB3IL1Q8TBN0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IL1Q8TBN0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms