Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 AC004854.2-201ENST00000608450 1441 ntBASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 IKBKGP1-201ENST00000612193 1073 ntBASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 AC080038.3-201ENST00000623346 1952 ntBASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.17■□□□□ 0.66
FNDC9Q8TBE3 AP004607.4-201ENST00000530158 1459 ntBASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.16■□□□□ 0.66
FNDC9Q8TBE3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 AC127496.7-201ENST00000625110 1798 ntBASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 AC055733.4-201ENST00000638462 1354 ntBASIC19.15■□□□□ 0.66
FNDC9Q8TBE3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FNDC9Q8TBE3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
FNDC9Q8TBE3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms