Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AL358852.1-201ENST00000623174 1268 ntBASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HMGCLL1Q8TB92 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 AL354811.1-201ENST00000610286 706 ntBASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 AC105233.4-201ENST00000642045 216 ntBASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMGCLL1Q8TB92 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.95
HMGCLL1Q8TB92 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.95■□□□□ 0.95
HMGCLL1Q8TB92 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 AC244015.2-201ENST00000616358 1861 ntBASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMGCLL1Q8TB92 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCLL1Q8TB92 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCLL1Q8TB92 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.94■□□□□ 0.94
HMGCLL1Q8TB92 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.94■□□□□ 0.94
HMGCLL1Q8TB92 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.94■□□□□ 0.94
HMGCLL1Q8TB92 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HMGCLL1Q8TB92 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCLL1Q8TB92 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.94■□□□□ 0.94
HMGCLL1Q8TB92 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCLL1Q8TB92 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
HMGCLL1Q8TB92 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 SLC25A24-204ENST00000569674 2357 ntBASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 OR7E47P-201ENST00000546390 1422 ntBASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLL1Q8TB92 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCLL1Q8TB92 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms