Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
RETREG2Q8NC44 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.19■■□□□ 1.46
RETREG2Q8NC44 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 KRT18P11-201ENST00000435214 1283 ntBASIC24.18■■□□□ 1.46
RETREG2Q8NC44 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.18■■□□□ 1.46
RETREG2Q8NC44 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 AL109923.1-201ENST00000618799 583 ntBASIC24.18■■□□□ 1.46
RETREG2Q8NC44 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RETREG2Q8NC44 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.17■■□□□ 1.46
RETREG2Q8NC44 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
RETREG2Q8NC44 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
RETREG2Q8NC44 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.17■■□□□ 1.46
RETREG2Q8NC44 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RETREG2Q8NC44 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RETREG2Q8NC44 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RETREG2Q8NC44 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 SMUG1P1-201ENST00000590640 811 ntBASIC24.16■■□□□ 1.46
RETREG2Q8NC44 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RETREG2Q8NC44 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 AL355802.2-201ENST00000402069 882 ntBASIC24.15■■□□□ 1.46
RETREG2Q8NC44 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 AC011767.1-201ENST00000617410 1153 ntBASIC24.15■■□□□ 1.46
RETREG2Q8NC44 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.15■■□□□ 1.46
RETREG2Q8NC44 AC139530.1-201ENST00000575312 1977 ntBASIC24.14■■□□□ 1.46
RETREG2Q8NC44 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RETREG2Q8NC44 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RETREG2Q8NC44 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
RETREG2Q8NC44 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RETREG2Q8NC44 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RETREG2Q8NC44 CROCCP5-201ENST00000436658 830 ntBASIC24.14■■□□□ 1.45
RETREG2Q8NC44 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RETREG2Q8NC44 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.14■■□□□ 1.45
RETREG2Q8NC44 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.14■■□□□ 1.45
RETREG2Q8NC44 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.14■■□□□ 1.45
RETREG2Q8NC44 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
RETREG2Q8NC44 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 AC079140.4-201ENST00000507448 529 ntBASIC24.13■■□□□ 1.45
RETREG2Q8NC44 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.13■■□□□ 1.45
RETREG2Q8NC44 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RETREG2Q8NC44 AC092053.2-201ENST00000640557 1818 ntBASIC24.12■■□□□ 1.45
RETREG2Q8NC44 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RETREG2Q8NC44 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
RETREG2Q8NC44 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RETREG2Q8NC44 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.12■■□□□ 1.45
RETREG2Q8NC44 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RETREG2Q8NC44 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RETREG2Q8NC44 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.12■■□□□ 1.45
RETREG2Q8NC44 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RETREG2Q8NC44 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RETREG2Q8NC44 LINC01960-201ENST00000563759 1884 ntBASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms