Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CLDN22Q8N7P3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN22Q8N7P3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN22Q8N7P3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 AC026471.6-201ENST00000622954 1905 ntBASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN22Q8N7P3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN22Q8N7P3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN22Q8N7P3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 SERBP1P1-201ENST00000396021 1160 ntBASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN22Q8N7P3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 AC010141.3-201ENST00000456659 717 ntBASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 AC010525.1-201ENST00000585559 441 ntBASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN22Q8N7P3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.37■□□□□ 0.69
CLDN22Q8N7P3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 AL034346.1-201ENST00000568244 1277 ntBASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 AC092171.4-201ENST00000609130 632 ntBASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 SYT6-210ENST00000641643 1587 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms