Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS52Q8N1B4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 UBE2DNL-204ENST00000602536 740 ntBASIC23.06■■□□□ 1.28
VPS52Q8N1B4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
VPS52Q8N1B4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS52Q8N1B4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS52Q8N1B4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS52Q8N1B4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
VPS52Q8N1B4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.05■■□□□ 1.28
VPS52Q8N1B4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
VPS52Q8N1B4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS52Q8N1B4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS52Q8N1B4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.05■■□□□ 1.28
VPS52Q8N1B4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 DUX4L16-201ENST00000555130 1264 ntBASIC23.04■■□□□ 1.28
VPS52Q8N1B4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 AC231657.2-201ENST00000624556 255 ntBASIC23.04■■□□□ 1.28
VPS52Q8N1B4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
VPS52Q8N1B4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 ABHD17AP1-201ENST00000358206 933 ntBASIC23.03■■□□□ 1.28
VPS52Q8N1B4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 AP001160.3-201ENST00000601484 763 ntBASIC23.03■■□□□ 1.28
VPS52Q8N1B4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 AL121832.2-201ENST00000610979 668 ntBASIC23.03■■□□□ 1.28
VPS52Q8N1B4 AL050303.2-201ENST00000619798 666 ntBASIC23.03■■□□□ 1.28
VPS52Q8N1B4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS52Q8N1B4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS52Q8N1B4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
VPS52Q8N1B4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS52Q8N1B4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS52Q8N1B4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS52Q8N1B4 AC083906.2-201ENST00000511578 360 ntBASIC23.02■■□□□ 1.28
VPS52Q8N1B4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS52Q8N1B4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
VPS52Q8N1B4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS52Q8N1B4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS52Q8N1B4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS52Q8N1B4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.27
VPS52Q8N1B4 AC055733.4-201ENST00000638462 1354 ntBASIC23.01■■□□□ 1.27
VPS52Q8N1B4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS52Q8N1B4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS52Q8N1B4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS52Q8N1B4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
VPS52Q8N1B4 AC007322.1-201ENST00000426983 750 ntBASIC23.01■■□□□ 1.27
VPS52Q8N1B4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
VPS52Q8N1B4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.01■■□□□ 1.27
VPS52Q8N1B4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.01■■□□□ 1.27
VPS52Q8N1B4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms