Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AP006587.3-201ENST00000525742 1516 ntBASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 AC099791.1-201ENST00000416440 715 ntBASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 AC110285.6-201ENST00000617652 491 ntBASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1LQ86WJ1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.82
CHD1LQ86WJ1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC26.39■■□□□ 1.82
CHD1LQ86WJ1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.39■■□□□ 1.82
CHD1LQ86WJ1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
CHD1LQ86WJ1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHD1LQ86WJ1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.39■■□□□ 1.82
CHD1LQ86WJ1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.39■■□□□ 1.82
CHD1LQ86WJ1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.39■■□□□ 1.82
CHD1LQ86WJ1 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.39■■□□□ 1.82
CHD1LQ86WJ1 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.39■■□□□ 1.82
CHD1LQ86WJ1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHD1LQ86WJ1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD1LQ86WJ1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD1LQ86WJ1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD1LQ86WJ1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.37■■□□□ 1.81
CHD1LQ86WJ1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.37■■□□□ 1.81
CHD1LQ86WJ1 AP001330.3-201ENST00000520123 633 ntBASIC26.37■■□□□ 1.81
CHD1LQ86WJ1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.37■■□□□ 1.81
CHD1LQ86WJ1 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.37■■□□□ 1.81
CHD1LQ86WJ1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.37■■□□□ 1.81
CHD1LQ86WJ1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD1LQ86WJ1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1LQ86WJ1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1LQ86WJ1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.36■■□□□ 1.81
CHD1LQ86WJ1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
CHD1LQ86WJ1 AC027682.1-201ENST00000562846 899 ntBASIC26.36■■□□□ 1.81
CHD1LQ86WJ1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.36■■□□□ 1.81
CHD1LQ86WJ1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1LQ86WJ1 AL024507.2-201ENST00000606070 2574 ntBASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 EDA-201ENST00000338901 1233 ntBASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD1LQ86WJ1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 AL031432.3-201ENST00000607698 485 ntBASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 TSPY26P-201ENST00000476365 1326 ntBASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CHD1LQ86WJ1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD1LQ86WJ1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
CHD1LQ86WJ1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.33■■□□□ 1.81
CHD1LQ86WJ1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD1LQ86WJ1 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms