Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LRRTM3Q86VH5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LRRTM3Q86VH5 AC010141.2-201ENST00000452426 721 ntBASIC22.58■■□□□ 1.21
LRRTM3Q86VH5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.58■■□□□ 1.21
LRRTM3Q86VH5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.58■■□□□ 1.21
LRRTM3Q86VH5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.58■■□□□ 1.21
LRRTM3Q86VH5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.58■■□□□ 1.21
LRRTM3Q86VH5 AC026471.6-201ENST00000622954 1905 ntBASIC22.58■■□□□ 1.21
LRRTM3Q86VH5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LRRTM3Q86VH5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.58■■□□□ 1.2
LRRTM3Q86VH5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.58■■□□□ 1.2
LRRTM3Q86VH5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LRRTM3Q86VH5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
LRRTM3Q86VH5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
LRRTM3Q86VH5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
LRRTM3Q86VH5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 AC053503.5-201ENST00000601508 636 ntBASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRTM3Q86VH5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRTM3Q86VH5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 AC026185.1-201ENST00000445748 174 ntBASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 AC003102.1-202ENST00000563394 1796 ntBASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.55■■□□□ 1.2
LRRTM3Q86VH5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRTM3Q86VH5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 AC068473.5-201ENST00000616428 2072 ntBASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 CROCCP5-201ENST00000436658 830 ntBASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 DUX4L16-201ENST00000555130 1264 ntBASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 MYCNOS-205ENST00000641950 531 ntBASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM3Q86VH5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms