Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ZNF550Q7Z398 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF550Q7Z398 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF550Q7Z398 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF550Q7Z398 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF550Q7Z398 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF550Q7Z398 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF550Q7Z398 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF550Q7Z398 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF550Q7Z398 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 IGHV3-19-201ENST00000521488 291 ntBASIC19.61■□□□□ 0.73
ZNF550Q7Z398 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF550Q7Z398 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.6■□□□□ 0.73
ZNF550Q7Z398 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF550Q7Z398 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ZNF550Q7Z398 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.58■□□□□ 0.73
ZNF550Q7Z398 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF550Q7Z398 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 MIR5787-201ENST00000611784 55 ntBASIC19.58■□□□□ 0.72
ZNF550Q7Z398 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 AC026471.6-201ENST00000622954 1905 ntBASIC19.58■□□□□ 0.72
ZNF550Q7Z398 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ZNF550Q7Z398 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ZNF550Q7Z398 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF550Q7Z398 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF550Q7Z398 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF550Q7Z398 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF550Q7Z398 IRS3P-201ENST00000223076 1006 ntBASIC19.57■□□□□ 0.72
ZNF550Q7Z398 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF550Q7Z398 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF550Q7Z398 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF550Q7Z398 SMUG1P1-201ENST00000590640 811 ntBASIC19.57■□□□□ 0.72
ZNF550Q7Z398 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF550Q7Z398 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms