Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF44Q7L0R7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RNF44Q7L0R7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF44Q7L0R7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF44Q7L0R7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 ECEL1P1-201ENST00000373592 1742 ntBASIC20.44■□□□□ 0.86
RNF44Q7L0R7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 KRT18P61-201ENST00000585825 1298 ntBASIC20.44■□□□□ 0.86
RNF44Q7L0R7 NTF6G-201ENST00000591094 616 ntBASIC20.44■□□□□ 0.86
RNF44Q7L0R7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF44Q7L0R7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 KRT87P-202ENST00000534226 1464 ntBASIC20.43■□□□□ 0.86
RNF44Q7L0R7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 AP004607.4-201ENST00000530158 1459 ntBASIC20.43■□□□□ 0.86
RNF44Q7L0R7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF44Q7L0R7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 AC004854.2-201ENST00000608450 1441 ntBASIC20.42■□□□□ 0.86
RNF44Q7L0R7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF44Q7L0R7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF44Q7L0R7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF44Q7L0R7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF44Q7L0R7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms