Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 MIR939-201ENST00000401314 82 ntBASIC21.53■■□□□ 1.04
PACS1Q6VY07 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PACS1Q6VY07 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.53■■□□□ 1.04
PACS1Q6VY07 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PACS1Q6VY07 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PACS1Q6VY07 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.52■■□□□ 1.04
PACS1Q6VY07 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PACS1Q6VY07 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
PACS1Q6VY07 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PACS1Q6VY07 AC099791.1-201ENST00000416440 715 ntBASIC21.52■■□□□ 1.04
PACS1Q6VY07 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.52■■□□□ 1.04
PACS1Q6VY07 AC008764.7-201ENST00000593779 1081 ntBASIC21.52■■□□□ 1.04
PACS1Q6VY07 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PACS1Q6VY07 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PACS1Q6VY07 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PACS1Q6VY07 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PACS1Q6VY07 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS1Q6VY07 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS1Q6VY07 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
PACS1Q6VY07 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS1Q6VY07 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS1Q6VY07 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS1Q6VY07 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.51■■□□□ 1.03
PACS1Q6VY07 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS1Q6VY07 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PACS1Q6VY07 AC091305.1-201ENST00000479476 895 ntBASIC21.51■■□□□ 1.03
PACS1Q6VY07 SUDS3P1-201ENST00000505831 966 ntBASIC21.51■■□□□ 1.03
PACS1Q6VY07 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.51■■□□□ 1.03
PACS1Q6VY07 AF213884.3-201ENST00000563833 479 ntBASIC21.51■■□□□ 1.03
PACS1Q6VY07 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS1Q6VY07 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PACS1Q6VY07 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.51■■□□□ 1.03
PACS1Q6VY07 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PACS1Q6VY07 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PACS1Q6VY07 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.51■■□□□ 1.03
PACS1Q6VY07 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS1Q6VY07 PKD1P6-201ENST00000343738 4769 ntBASIC21.51■■□□□ 1.03
PACS1Q6VY07 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.5■■□□□ 1.03
PACS1Q6VY07 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 OXCT2P1-201ENST00000447263 1535 ntBASIC21.5■■□□□ 1.03
PACS1Q6VY07 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PACS1Q6VY07 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.5■■□□□ 1.03
PACS1Q6VY07 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 SLC25A24-204ENST00000569674 2357 ntBASIC21.5■■□□□ 1.03
PACS1Q6VY07 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.5■■□□□ 1.03
PACS1Q6VY07 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.5■■□□□ 1.03
PACS1Q6VY07 AC126544.1-201ENST00000580842 1059 ntBASIC21.5■■□□□ 1.03
PACS1Q6VY07 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 AL136967.2-201ENST00000623968 743 ntBASIC21.5■■□□□ 1.03
PACS1Q6VY07 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.5■■□□□ 1.03
PACS1Q6VY07 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PACS1Q6VY07 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.5■■□□□ 1.03
PACS1Q6VY07 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.5■■□□□ 1.03
PACS1Q6VY07 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.5■■□□□ 1.03
PACS1Q6VY07 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PACS1Q6VY07 RASA4CP-201ENST00000424092 1398 ntBASIC21.49■■□□□ 1.03
PACS1Q6VY07 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.49■■□□□ 1.03
PACS1Q6VY07 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS1Q6VY07 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.49■■□□□ 1.03
PACS1Q6VY07 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.49■■□□□ 1.03
PACS1Q6VY07 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS1Q6VY07 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.49■■□□□ 1.03
PACS1Q6VY07 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS1Q6VY07 IGHV3-19-201ENST00000521488 291 ntBASIC21.49■■□□□ 1.03
PACS1Q6VY07 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.49■■□□□ 1.03
PACS1Q6VY07 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.49■■□□□ 1.03
PACS1Q6VY07 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PACS1Q6VY07 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS1Q6VY07 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS1Q6VY07 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS1Q6VY07 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS1Q6VY07 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PACS1Q6VY07 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
PACS1Q6VY07 FEM1AP4-201ENST00000443167 1987 ntBASIC21.48■■□□□ 1.03
PACS1Q6VY07 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.48■■□□□ 1.03
PACS1Q6VY07 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PACS1Q6VY07 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PACS1Q6VY07 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PACS1Q6VY07 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.48■■□□□ 1.03
PACS1Q6VY07 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.48■■□□□ 1.03
PACS1Q6VY07 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.48■■□□□ 1.03
PACS1Q6VY07 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PACS1Q6VY07 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PACS1Q6VY07 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PACS1Q6VY07 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.48■■□□□ 1.03
PACS1Q6VY07 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PACS1Q6VY07 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PACS1Q6VY07 MIR638-201ENST00000385237 100 ntBASIC21.47■■□□□ 1.03
PACS1Q6VY07 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms