Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 AC026471.6-201ENST00000622954 1905 ntBASIC19.41■□□□□ 0.7
SMARCD3Q6STE5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 AC010141.3-201ENST00000456659 717 ntBASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 AC104564.3-201ENST00000582367 638 ntBASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCD3Q6STE5 AF106564.1-201ENST00000607058 2553 ntBASIC19.39■□□□□ 0.7
SMARCD3Q6STE5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.39■□□□□ 0.7
SMARCD3Q6STE5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCD3Q6STE5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.39■□□□□ 0.7
SMARCD3Q6STE5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 AL512631.2-201ENST00000604634 923 ntBASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCD3Q6STE5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD3Q6STE5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD3Q6STE5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCD3Q6STE5 OXCT2P1-201ENST00000447263 1535 ntBASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 FEM1AP4-201ENST00000443167 1987 ntBASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 AC010525.1-201ENST00000585559 441 ntBASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCD3Q6STE5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SMARCD3Q6STE5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCD3Q6STE5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms