Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NFRKBQ6P4R8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
NFRKBQ6P4R8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NFRKBQ6P4R8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
NFRKBQ6P4R8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.08■■□□□ 1.44
NFRKBQ6P4R8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 ABHD17AP1-201ENST00000358206 933 ntBASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 AC231657.2-201ENST00000624556 255 ntBASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NFRKBQ6P4R8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NFRKBQ6P4R8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 AC142086.2-201ENST00000569753 217 ntBASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NFRKBQ6P4R8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 DUX4L16-201ENST00000555130 1264 ntBASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 AL121832.2-201ENST00000610979 668 ntBASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NFRKBQ6P4R8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 AL050303.2-201ENST00000619798 666 ntBASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NFRKBQ6P4R8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 LINC01960-201ENST00000563759 1884 ntBASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 UBE2DNL-204ENST00000602536 740 ntBASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
NFRKBQ6P4R8 GUSBP5-202ENST00000510805 1989 ntBASIC24.02■■□□□ 1.43
NFRKBQ6P4R8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NFRKBQ6P4R8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
NFRKBQ6P4R8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
NFRKBQ6P4R8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
NFRKBQ6P4R8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NFRKBQ6P4R8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
NFRKBQ6P4R8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
NFRKBQ6P4R8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NFRKBQ6P4R8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NFRKBQ6P4R8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.01■■□□□ 1.43
NFRKBQ6P4R8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms