Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 MIR935-201ENST00000401179 91 ntBASIC19.46■□□□□ 0.71
ZNF544Q6NX49 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 AL138724.1-201ENST00000606771 1088 ntBASIC19.46■□□□□ 0.71
ZNF544Q6NX49 AL355001.2-201ENST00000620617 1191 ntBASIC19.46■□□□□ 0.71
ZNF544Q6NX49 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ZNF544Q6NX49 C17orf82-201ENST00000623772 1530 ntBASIC19.46■□□□□ 0.71
ZNF544Q6NX49 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF544Q6NX49 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF544Q6NX49 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF544Q6NX49 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ZNF544Q6NX49 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF544Q6NX49 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF544Q6NX49 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ZNF544Q6NX49 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF544Q6NX49 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 AC099791.2-201ENST00000605725 427 ntBASIC19.44■□□□□ 0.7
ZNF544Q6NX49 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 AC007952.6-201ENST00000573168 2673 ntBASIC19.44■□□□□ 0.7
ZNF544Q6NX49 AC003957.1-201ENST00000625108 2673 ntBASIC19.44■□□□□ 0.7
ZNF544Q6NX49 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF544Q6NX49 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 AL391422.3-201ENST00000603791 2761 ntBASIC19.43■□□□□ 0.7
ZNF544Q6NX49 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ZNF544Q6NX49 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 SUDS3P1-201ENST00000505831 966 ntBASIC19.42■□□□□ 0.7
ZNF544Q6NX49 AL031432.3-201ENST00000607698 485 ntBASIC19.42■□□□□ 0.7
ZNF544Q6NX49 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 LINC01529-204ENST00000636474 1715 ntBASIC19.42■□□□□ 0.7
ZNF544Q6NX49 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF544Q6NX49 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 AC011298.3-201ENST00000615796 283 ntBASIC19.41■□□□□ 0.7
ZNF544Q6NX49 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 FP325331.1-202ENST00000623531 1380 ntBASIC19.41■□□□□ 0.7
ZNF544Q6NX49 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF544Q6NX49 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF544Q6NX49 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF544Q6NX49 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ZNF544Q6NX49 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF544Q6NX49 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF544Q6NX49 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF544Q6NX49 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms