Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 SLC29A4P2-201ENST00000504749 1089 ntBASIC11.61□□□□□ -0.55
RNF213Q63HN8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.61□□□□□ -0.55
RNF213Q63HN8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
RNF213Q63HN8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RNF213Q63HN8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 BX664615.1-201ENST00000443558 458 ntBASIC11.61□□□□□ -0.55
RNF213Q63HN8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 HLA-L-211ENST00000482052 1765 ntBASIC11.61□□□□□ -0.55
RNF213Q63HN8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF213Q63HN8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 AC005224.4-201ENST00000583262 1652 ntBASIC11.6□□□□□ -0.55
RNF213Q63HN8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 AC069544.1-201ENST00000609399 999 ntBASIC11.6□□□□□ -0.55
RNF213Q63HN8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC11.6□□□□□ -0.55
RNF213Q63HN8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RNF213Q63HN8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC11.59□□□□□ -0.55
RNF213Q63HN8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF213Q63HN8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF213Q63HN8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF213Q63HN8 SOX15-203ENST00000570788 1093 ntBASIC11.59□□□□□ -0.55
RNF213Q63HN8 AC069236.1-201ENST00000604339 616 ntBASIC11.59□□□□□ -0.55
RNF213Q63HN8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
RNF213Q63HN8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.59□□□□□ -0.55
RNF213Q63HN8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF213Q63HN8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC11.59□□□□□ -0.55
RNF213Q63HN8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RNF213Q63HN8 Six3os1_6.1-201ENST00000620790 196 ntBASIC11.59□□□□□ -0.55
RNF213Q63HN8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RNF213Q63HN8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RNF213Q63HN8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RNF213Q63HN8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC11.59□□□□□ -0.55
RNF213Q63HN8 AL135905.2-201ENST00000584934 1404 ntBASIC11.59□□□□□ -0.55
RNF213Q63HN8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
RNF213Q63HN8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.59□□□□□ -0.55
RNF213Q63HN8 AP001412.1-201ENST00000608405 714 ntBASIC11.59□□□□□ -0.55
RNF213Q63HN8 KRT8P9-201ENST00000558927 1449 ntBASIC11.58□□□□□ -0.55
RNF213Q63HN8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
RNF213Q63HN8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 AC135731.1-201ENST00000569415 2548 ntBASIC11.58□□□□□ -0.56
RNF213Q63HN8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 AP003071.4-201ENST00000562276 1284 ntBASIC11.58□□□□□ -0.56
RNF213Q63HN8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 AL031963.3-201ENST00000606441 850 ntBASIC11.58□□□□□ -0.56
RNF213Q63HN8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 ALDH1A3-203ENST00000557963 1670 ntBASIC11.58□□□□□ -0.56
RNF213Q63HN8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 AL450487.1-201ENST00000426799 995 ntBASIC11.58□□□□□ -0.56
RNF213Q63HN8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 AC010141.2-201ENST00000452426 721 ntBASIC11.58□□□□□ -0.56
RNF213Q63HN8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC11.58□□□□□ -0.56
RNF213Q63HN8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF213Q63HN8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms