Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS13DQ5THJ4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS13DQ5THJ4 AC091874.3-201ENST00000512672 1195 ntBASIC14.53□□□□□ -0.08
VPS13DQ5THJ4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC14.53□□□□□ -0.08
VPS13DQ5THJ4 AL355472.2-201ENST00000422958 438 ntBASIC14.53□□□□□ -0.08
VPS13DQ5THJ4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
VPS13DQ5THJ4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS13DQ5THJ4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS13DQ5THJ4 AC006058.3-201ENST00000606217 1069 ntBASIC14.52□□□□□ -0.08
VPS13DQ5THJ4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.52□□□□□ -0.08
VPS13DQ5THJ4 OR10C1-204ENST00000622521 1039 ntBASIC14.52□□□□□ -0.08
VPS13DQ5THJ4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VPS13DQ5THJ4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
VPS13DQ5THJ4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
VPS13DQ5THJ4 MIR4758-201ENST00000577688 71 ntBASIC14.52□□□□□ -0.08
VPS13DQ5THJ4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VPS13DQ5THJ4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.52□□□□□ -0.08
VPS13DQ5THJ4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VPS13DQ5THJ4 LINC00526-201ENST00000581067 1875 ntBASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13DQ5THJ4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 AC211429.1-201ENST00000415277 523 ntBASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
VPS13DQ5THJ4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 RNA5SP413-201ENST00000516373 109 ntBASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS13DQ5THJ4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 FAM201B-201ENST00000458407 597 ntBASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 AC079089.2-201ENST00000531211 1277 ntBASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13DQ5THJ4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13DQ5THJ4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13DQ5THJ4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13DQ5THJ4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms