Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 AC073111.5-205ENST00000641717 521 ntBASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.79■■□□□ 1.56
CCDC144BQ3MJ40 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC144BQ3MJ40 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.78■■□□□ 1.56
CCDC144BQ3MJ40 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.78■■□□□ 1.56
CCDC144BQ3MJ40 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.78■■□□□ 1.56
CCDC144BQ3MJ40 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.78■■□□□ 1.56
CCDC144BQ3MJ40 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.78■■□□□ 1.56
CCDC144BQ3MJ40 SMUG1P1-201ENST00000590640 811 ntBASIC24.78■■□□□ 1.56
CCDC144BQ3MJ40 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC144BQ3MJ40 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 AC010141.3-201ENST00000456659 717 ntBASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC144BQ3MJ40 AC139530.1-201ENST00000575312 1977 ntBASIC24.76■■□□□ 1.55
CCDC144BQ3MJ40 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
CCDC144BQ3MJ40 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CCDC144BQ3MJ40 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC144BQ3MJ40 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC144BQ3MJ40 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC144BQ3MJ40 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.76■■□□□ 1.55
CCDC144BQ3MJ40 AC087239.1-201ENST00000622671 572 ntBASIC24.76■■□□□ 1.55
CCDC144BQ3MJ40 ESRRAP2-201ENST00000418437 1549 ntBASIC24.76■■□□□ 1.55
CCDC144BQ3MJ40 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC144BQ3MJ40 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC144BQ3MJ40 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CCDC144BQ3MJ40 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 BID-214ENST00000617586 542 ntTSL 5 BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC144BQ3MJ40 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC144BQ3MJ40 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC144BQ3MJ40 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.71■■□□□ 1.55
CCDC144BQ3MJ40 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.71■■□□□ 1.55
CCDC144BQ3MJ40 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC144BQ3MJ40 KRT19P1-201ENST00000405746 1186 ntBASIC24.71■■□□□ 1.55
CCDC144BQ3MJ40 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.71■■□□□ 1.55
CCDC144BQ3MJ40 AC026185.1-201ENST00000445748 174 ntBASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms