Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 RCN1P1-201ENST00000400413 996 ntBASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 AC135731.1-201ENST00000569415 2548 ntBASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 ARMC10P1-201ENST00000313754 855 ntBASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RSPO4Q2I0M5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 AC055733.4-201ENST00000638462 1354 ntBASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 KRT18P35-201ENST00000510488 1269 ntBASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.86■□□□□ 0.93
RSPO4Q2I0M5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RSPO4Q2I0M5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RSPO4Q2I0M5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.84■□□□□ 0.93
RSPO4Q2I0M5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.84■□□□□ 0.93
RSPO4Q2I0M5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.84■□□□□ 0.93
RSPO4Q2I0M5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RSPO4Q2I0M5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.84■□□□□ 0.93
RSPO4Q2I0M5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.84■□□□□ 0.93
RSPO4Q2I0M5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.84■□□□□ 0.93
RSPO4Q2I0M5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 KRT17P2-201ENST00000300992 1314 ntBASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 RN7SL471P-201ENST00000580476 299 ntBASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.83■□□□□ 0.93
RSPO4Q2I0M5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RSPO4Q2I0M5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO4Q2I0M5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 LSM12P1-201ENST00000411836 588 ntBASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 KRT17P3-201ENST00000420566 1262 ntBASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.81■□□□□ 0.92
RSPO4Q2I0M5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms