Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CLDN18P56856 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN18P56856 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN18P56856 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN18P56856 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN18P56856 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN18P56856 AC233723.2-201ENST00000623798 2106 ntBASIC19.12■□□□□ 0.65
CLDN18P56856 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN18P56856 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN18P56856 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN18P56856 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN18P56856 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN18P56856 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN18P56856 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CLDN18P56856 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN18P56856 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN18P56856 AP001160.3-201ENST00000601484 763 ntBASIC19.11■□□□□ 0.65
CLDN18P56856 RARRES2P11-201ENST00000635158 484 ntBASIC19.11■□□□□ 0.65
CLDN18P56856 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN18P56856 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN18P56856 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN18P56856 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN18P56856 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN18P56856 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLDN18P56856 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 AC242852.2-201ENST00000615738 1807 ntBASIC19.1■□□□□ 0.65
CLDN18P56856 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN18P56856 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN18P56856 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 KRT18P11-201ENST00000435214 1283 ntBASIC19.1■□□□□ 0.65
CLDN18P56856 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.1■□□□□ 0.65
CLDN18P56856 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 AC138907.5-202ENST00000569484 235 ntBASIC19.1■□□□□ 0.65
CLDN18P56856 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.1■□□□□ 0.65
CLDN18P56856 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CLDN18P56856 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
CLDN18P56856 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN18P56856 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN18P56856 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLDN18P56856 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN18P56856 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN18P56856 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN18P56856 AC010141.2-201ENST00000452426 721 ntBASIC19.09■□□□□ 0.65
CLDN18P56856 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.09■□□□□ 0.65
CLDN18P56856 AC053503.5-201ENST00000601508 636 ntBASIC19.09■□□□□ 0.65
CLDN18P56856 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN18P56856 GUSBP5-202ENST00000510805 1989 ntBASIC19.09■□□□□ 0.65
CLDN18P56856 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN18P56856 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN18P56856 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN18P56856 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.08■□□□□ 0.65
CLDN18P56856 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CLDN18P56856 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.08■□□□□ 0.65
CLDN18P56856 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN18P56856 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
CLDN18P56856 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.08■□□□□ 0.65
CLDN18P56856 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.08■□□□□ 0.64
CLDN18P56856 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.08■□□□□ 0.64
CLDN18P56856 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN18P56856 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN18P56856 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN18P56856 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN18P56856 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CLDN18P56856 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLDN18P56856 AC003102.1-202ENST00000563394 1796 ntBASIC19.07■□□□□ 0.64
CLDN18P56856 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN18P56856 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN18P56856 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLDN18P56856 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN18P56856 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN18P56856 AC090192.1-201ENST00000517740 490 ntBASIC19.07■□□□□ 0.64
CLDN18P56856 BID-214ENST00000617586 542 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN18P56856 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms