Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN8P56748 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN8P56748 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLDN8P56748 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN8P56748 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN8P56748 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN8P56748 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.28■□□□□ 0.84
CLDN8P56748 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN8P56748 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.28■□□□□ 0.84
CLDN8P56748 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLDN8P56748 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN8P56748 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN8P56748 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN8P56748 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN8P56748 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN8P56748 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN8P56748 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN8P56748 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN8P56748 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN8P56748 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN8P56748 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN8P56748 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN8P56748 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLDN8P56748 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN8P56748 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CLDN8P56748 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN8P56748 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN8P56748 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLDN8P56748 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN8P56748 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLDN8P56748 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN8P56748 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN8P56748 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN8P56748 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN8P56748 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLDN8P56748 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLDN8P56748 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN8P56748 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN8P56748 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN8P56748 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN8P56748 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN8P56748 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN8P56748 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN8P56748 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CLDN8P56748 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLDN8P56748 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN8P56748 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN8P56748 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN8P56748 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.25■□□□□ 0.83
CLDN8P56748 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN8P56748 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.25■□□□□ 0.83
CLDN8P56748 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN8P56748 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN8P56748 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLDN8P56748 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN8P56748 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN8P56748 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.24■□□□□ 0.83
CLDN8P56748 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN8P56748 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLDN8P56748 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN8P56748 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN8P56748 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLDN8P56748 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN8P56748 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN8P56748 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN8P56748 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN8P56748 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN8P56748 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
CLDN8P56748 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
CLDN8P56748 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.23■□□□□ 0.83
CLDN8P56748 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN8P56748 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN8P56748 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN8P56748 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN8P56748 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN8P56748 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN8P56748 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN8P56748 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN8P56748 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms