Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A12P48065 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A12P48065 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A12P48065 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A12P48065 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A12P48065 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A12P48065 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A12P48065 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SLC6A12P48065 BX005040.4-201ENST00000637145 1518 ntBASIC20.65■□□□□ 0.9
SLC6A12P48065 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A12P48065 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A12P48065 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SLC6A12P48065 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A12P48065 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SLC6A12P48065 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC6A12P48065 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A12P48065 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SLC6A12P48065 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A12P48065 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A12P48065 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A12P48065 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC6A12P48065 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.64■□□□□ 0.9
SLC6A12P48065 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
SLC6A12P48065 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC6A12P48065 AC055733.4-201ENST00000638462 1354 ntBASIC20.64■□□□□ 0.89
SLC6A12P48065 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A12P48065 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.64■□□□□ 0.89
SLC6A12P48065 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC6A12P48065 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A12P48065 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC6A12P48065 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC6A12P48065 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC6A12P48065 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC6A12P48065 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A12P48065 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SLC6A12P48065 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC6A12P48065 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A12P48065 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC6A12P48065 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
SLC6A12P48065 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A12P48065 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC6A12P48065 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC6A12P48065 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC6A12P48065 AC005224.4-201ENST00000583262 1652 ntBASIC20.63■□□□□ 0.89
SLC6A12P48065 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A12P48065 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A12P48065 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A12P48065 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC6A12P48065 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A12P48065 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC6A12P48065 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A12P48065 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A12P48065 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A12P48065 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC6A12P48065 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC6A12P48065 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC6A12P48065 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC6A12P48065 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A12P48065 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A12P48065 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
SLC6A12P48065 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A12P48065 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC6A12P48065 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A12P48065 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC6A12P48065 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC6A12P48065 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A12P48065 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC6A12P48065 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC6A12P48065 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A12P48065 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A12P48065 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A12P48065 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC6A12P48065 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC6A12P48065 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A12P48065 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A12P48065 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A12P48065 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A12P48065 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC6A12P48065 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A12P48065 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A12P48065 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A12P48065 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC6A12P48065 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC6A12P48065 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC6A12P48065 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A12P48065 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A12P48065 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A12P48065 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SLC6A12P48065 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A12P48065 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
SLC6A12P48065 AL354811.1-201ENST00000610286 706 ntBASIC20.6■□□□□ 0.89
SLC6A12P48065 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A12P48065 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A12P48065 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SLC6A12P48065 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A12P48065 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A12P48065 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC6A12P48065 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A12P48065 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A12P48065 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms